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Student cluser competition universal workflow

module:scc-workflow (v1.0.0)
Creation date: 2019-06-20
Source: GitHub
cID: 032630d041b4fd8a:ff6e017442f29f73

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Description  

This is our attempt to share automation actions from scientific research projects as unified Python modules with a common CLI and Python API to help researchers and practitioners reuse best practices. Our on-going project is to make the onboarding process as simple as possible via this platform. Please check this CK white paper and don't hesitate to contact us if you have suggestions or feedback!
  • Automation framework: CK
  • Workflow: Student Cluster Competition universal workflow
  • Development repository: ck-scc
  • Source: GitHub
  • How to get the stable version from this portal via the CK client:
    pip install cbench
    cb download module:scc-workflow --version=1.0.0 --all
    ck help scc-workflow
  • How to get the development version:
    pip install ck
    ck pull repo --url=https://github.com/reproindex/ck-scc
    ck help scc-workflow
  • CK automation actions (CLI with the Python CK API and JSON IO):
    • ck compile scc-workflow - compile application (API)
    • ck download_data scc-workflow - download data for the workflow (API)
    • ck install_deps scc-workflow - install dependencies (API)
    • ck pack scc-workflow - pack your Digital Artifact (API)
    • ck plot scc-workflow - plot graphs (API)
    • ck post_process scc-workflow - post process results (API)
    • ck prepare scc-workflow - prepare SCC workflow (API)
    • ck run scc-workflow - run application (API)
    • ck run_analysis scc-workflow - run application (API)
    • ck test scc-workflow - test workflow (API)

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